The School of Graduate Studies has responsibility for graduate education through programs designed to advance scholarship and enhance professional competence. Bethune-Cookman University offers six graduate degrees at the Masters level and one graduate certificate in Organizational Development. Graduate degrees are offered in athletic training, counseling, criminal justice, education, environmental science, leadership and public health.

M.A.T. Master of Athletic Training - (2016-17)

M.S. Counseling - (2015-16) / (2016-17)

M.S. Criminal Justice Administration - (2015-16) / (2016-17)

M.S. Integrated Environmental Science - (2015-16) / (2016-17)

M.S. Organizational Leadership - (2015-16) / (2016-17) /(2017-18)

M.Ed. Exceptional Student Education - (2015-16) / (2016-17)

M.P.H. Master of Public Health - (2015-16) / (2016-17)